Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Tmem54Q9D7S1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tmem54Q9D7S1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gm11424-201ENSMUST00000121929 829 ntBASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 AC140375.2-201ENSMUST00000225283 584 ntBASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tmem54Q9D7S1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms