Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Gm13323-201ENSMUST00000120245 1151 ntBASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.42□□□□□ -0.26
Trim42Q9D2H5 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.42□□□□□ -0.26
Trim42Q9D2H5 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Mir698-201ENSMUST00000102164 109 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm12350-201ENSMUST00000121208 462 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm37714-201ENSMUST00000194742 342 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Gm17968-201ENSMUST00000194902 784 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Trim42Q9D2H5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Gm6222-201ENSMUST00000120787 396 ntBASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trim42Q9D2H5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim42Q9D2H5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms