Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Cotl1Q9CQI6 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm4691-201ENSMUST00000182339 1000 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm2451-201ENSMUST00000199447 999 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm10290-201ENSMUST00000200451 999 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Gm9449-201ENSMUST00000207265 1011 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Cotl1Q9CQI6 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.58□□□□□ -0.71
Cotl1Q9CQI6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
Cotl1Q9CQI6 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Gm14042-201ENSMUST00000120139 833 ntBASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Gm2651-201ENSMUST00000203560 838 ntBASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Gm9182-201ENSMUST00000217829 639 ntBASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 AC138767.1-201ENSMUST00000222661 415 ntBASIC10.58□□□□□ -0.72
Cotl1Q9CQI6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms