Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska1Q9CPV1 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Syt7-205ENSMUST00000224135 1557 ntBASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Gm8410-201ENSMUST00000117225 605 ntBASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Gm37935-201ENSMUST00000192012 982 ntBASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska1Q9CPV1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gm6415-201ENSMUST00000118488 348 ntBASIC12.68□□□□□ -0.38
Ska1Q9CPV1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gm37714-201ENSMUST00000194742 342 ntBASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gm5779-201ENSMUST00000218467 910 ntBASIC12.68□□□□□ -0.38
Ska1Q9CPV1 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gm8396-201ENSMUST00000057361 823 ntBASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska1Q9CPV1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms