Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.35□□□□□ -0.27
Trim33Q99PP7 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim33Q99PP7 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.34□□□□□ -0.27
Trim33Q99PP7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.34□□□□□ -0.27
Trim33Q99PP7 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim33Q99PP7 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim33Q99PP7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Gm12859-201ENSMUST00000117834 427 ntBASIC13.33□□□□□ -0.28
Trim33Q99PP7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Gm5354-201ENSMUST00000182417 973 ntBASIC13.33□□□□□ -0.28
Trim33Q99PP7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.33□□□□□ -0.28
Trim33Q99PP7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim33Q99PP7 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.33□□□□□ -0.28
Trim33Q99PP7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim33Q99PP7 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.33□□□□□ -0.28
Trim33Q99PP7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim33Q99PP7 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms