Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Raf1Q99N57 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Raf1Q99N57 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Raf1Q99N57 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Raf1Q99N57 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.08□□□□□ -0.48
Raf1Q99N57 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Raf1Q99N57 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.07□□□□□ -0.48
Raf1Q99N57 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.07□□□□□ -0.48
Raf1Q99N57 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.07□□□□□ -0.48
Raf1Q99N57 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.07□□□□□ -0.48
Raf1Q99N57 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Raf1Q99N57 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Raf1Q99N57 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Gm18027-201ENSMUST00000218947 619 ntBASIC12.06□□□□□ -0.48
Raf1Q99N57 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.06□□□□□ -0.48
Raf1Q99N57 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Raf1Q99N57 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Raf1Q99N57 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Raf1Q99N57 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms