Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Gm12585-201ENSMUST00000117307 290 ntBASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Gm27989-201ENSMUST00000184721 107 ntBASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Mir497b-201ENSMUST00000093601 125 ntBASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.02□□□□□ -0.33
Rnf111Q99ML9 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm5186-201ENSMUST00000218781 920 ntBASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf111Q99ML9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rnf111Q99ML9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Rnf111Q99ML9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Rnf111Q99ML9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Rnf111Q99ML9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Rnf111Q99ML9 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.99□□□□□ -0.33
Rnf111Q99ML9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rnf111Q99ML9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms