Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Gm12749-201ENSMUST00000122138 1159 ntBASIC20.82■□□□□ 0.92
Clip1Q922J3 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Gm6458-201ENSMUST00000211573 635 ntBASIC20.82■□□□□ 0.92
Clip1Q922J3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clip1Q922J3 Gm15897-201ENSMUST00000117770 1486 ntBASIC20.82■□□□□ 0.92
Clip1Q922J3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 AC159649.2-201ENSMUST00000222984 3223 ntBASIC20.81■□□□□ 0.92
Clip1Q922J3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Gm14381-201ENSMUST00000122105 414 ntBASIC20.81■□□□□ 0.92
Clip1Q922J3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Gm29199-201ENSMUST00000187766 775 ntBASIC20.81■□□□□ 0.92
Clip1Q922J3 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Clip1Q922J3 AC069562.3-201ENSMUST00000225387 587 ntBASIC20.81■□□□□ 0.92
Clip1Q922J3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC20.81■□□□□ 0.92
Clip1Q922J3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clip1Q922J3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clip1Q922J3 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Clip1Q922J3 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC20.8■□□□□ 0.92
Clip1Q922J3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC20.8■□□□□ 0.92
Clip1Q922J3 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
Clip1Q922J3 Gm17208-201ENSMUST00000168388 535 ntBASIC20.8■□□□□ 0.92
Clip1Q922J3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Clip1Q922J3 Gm27320-201ENSMUST00000184892 109 ntBASIC20.8■□□□□ 0.92
Clip1Q922J3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC20.8■□□□□ 0.92
Clip1Q922J3 AC122371.3-201ENSMUST00000223402 1061 ntBASIC20.8■□□□□ 0.92
Clip1Q922J3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clip1Q922J3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clip1Q922J3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Gm8738-201ENSMUST00000172606 329 ntBASIC20.79■□□□□ 0.92
Clip1Q922J3 Gm20482-202ENSMUST00000174729 825 ntBASIC20.79■□□□□ 0.92
Clip1Q922J3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Clip1Q922J3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clip1Q922J3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
Clip1Q922J3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Gm44207-201ENSMUST00000204568 1424 ntBASIC20.78■□□□□ 0.92
Clip1Q922J3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Clip1Q922J3 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC20.78■□□□□ 0.92
Clip1Q922J3 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC20.78■□□□□ 0.92
Clip1Q922J3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clip1Q922J3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms