Protein–RNA interactions for Protein: Q91Y17

Pcdha2, Protocadherin alpha 2, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha2Q91Y17 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Gm27839-201ENSMUST00000184242 106 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Gm44069-201ENSMUST00000204898 506 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha2Q91Y17 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Gm11978-201ENSMUST00000122315 466 ntBASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Gm17150-201ENSMUST00000165577 381 ntBASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Gm8602-201ENSMUST00000184045 607 ntBASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Gm27486-201ENSMUST00000184923 80 ntBASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha2Q91Y17 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdha2Q91Y17 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Gm43433-201ENSMUST00000196573 481 ntBASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdha2Q91Y17 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms