Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb20Q91XZ9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm5082-203ENSMUST00000221920 1518 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 AC153959.1-201ENSMUST00000213617 1694 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm13385-201ENSMUST00000121089 220 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm12327-201ENSMUST00000121729 1168 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm12998-201ENSMUST00000122445 789 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm24420-201ENSMUST00000176676 59 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm3809-201ENSMUST00000180973 1006 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm8927-201ENSMUST00000181978 981 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm3222-201ENSMUST00000071282 990 ntBASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Pcdhb20Q91XZ9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm25317-201ENSMUST00000116824 129 ntBASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm13460-201ENSMUST00000121274 353 ntBASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm5354-201ENSMUST00000182417 973 ntBASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr1295-201ENSMUST00000207283 1282 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.34□□□□□ -0.27
Pcdhb20Q91XZ9 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms