Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm22993-201ENSMUST00000175423 254 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm38225-201ENSMUST00000194001 393 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm18377-201ENSMUST00000215141 607 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gm24158-201ENSMUST00000175263 71 ntBASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gm7774-201ENSMUST00000200064 533 ntBASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gm9520-201ENSMUST00000209460 1253 ntBASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Pcdhb3Q91XZ7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Syt7-205ENSMUST00000224135 1557 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Gm45098-201ENSMUST00000207179 657 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC13.49□□□□□ -0.25
Pcdhb3Q91XZ7 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms