Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm13385-201ENSMUST00000121089 220 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm38000-201ENSMUST00000192390 1215 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm29705-201ENSMUST00000212598 474 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm45930-201ENSMUST00000221330 292 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 AC140406.1-201ENSMUST00000226481 465 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Mir433-201ENSMUST00000093564 124 ntBASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhga6Q91XY2 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm27331-201ENSMUST00000183705 60 ntBASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm43118-201ENSMUST00000199149 775 ntBASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm43758-201ENSMUST00000199500 367 ntBASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhga6Q91XY2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms