Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm17795-201ENSMUST00000214505 757 ntBASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm17330-201ENSMUST00000221047 165 ntBASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.88□□□□□ -0.35
Lsm1Q8VC85 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lsm1Q8VC85 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.87□□□□□ -0.35
Lsm1Q8VC85 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm1Q8VC85 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Mir874-201ENSMUST00000104769 76 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm12403-201ENSMUST00000121384 959 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.86□□□□□ -0.35
Lsm1Q8VC85 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms