Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Gm37714-201ENSMUST00000194742 342 ntBASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Gm18027-201ENSMUST00000218947 619 ntBASIC12.96□□□□□ -0.33
Rnf8Q8VC56 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.96□□□□□ -0.33
Rnf8Q8VC56 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rnf8Q8VC56 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rnf8Q8VC56 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm15393-201ENSMUST00000120499 219 ntBASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm4804-201ENSMUST00000182234 999 ntBASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Mir6977-201ENSMUST00000184960 64 ntBASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rnf8Q8VC56 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Gm2445-201ENSMUST00000182798 989 ntBASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rnf8Q8VC56 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms