Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gm13385-201ENSMUST00000121089 220 ntBASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gm12260-201ENSMUST00000122447 411 ntBASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gm21470-201ENSMUST00000187680 696 ntBASIC10.93□□□□□ -0.66
Nup35Q8R4R6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Nup35Q8R4R6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Gm15460-201ENSMUST00000118147 391 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Gm12428-201ENSMUST00000119844 727 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Nup35Q8R4R6 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gm25287-201ENSMUST00000103846 110 ntBASIC10.91□□□□□ -0.66
Nup35Q8R4R6 Gm22918-201ENSMUST00000103855 110 ntBASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms