Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm42872-201ENSMUST00000200026 1967 ntBASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chmp7Q8R1T1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm38042-201ENSMUST00000191614 5208 ntBASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm12363-201ENSMUST00000122250 668 ntBASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm4768-201ENSMUST00000206199 686 ntBASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm8227-201ENSMUST00000223306 571 ntBASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 n-R5s77-201ENSMUST00000083757 119 ntBASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chmp7Q8R1T1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm15370-201ENSMUST00000117158 253 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm12539-201ENSMUST00000121549 1098 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm2991-201ENSMUST00000173338 480 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm3890-201ENSMUST00000182416 207 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm37489-201ENSMUST00000191883 159 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm4857-201ENSMUST00000192718 785 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chmp7Q8R1T1 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Gm26083-201ENSMUST00000157904 193 ntBASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Gm7895-201ENSMUST00000187459 1173 ntBASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Gm5896-201ENSMUST00000189662 1024 ntBASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 AC132384.14-201ENSMUST00000219346 1147 ntBASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chmp7Q8R1T1 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 Gm7046-201ENSMUST00000221351 977 ntBASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chmp7Q8R1T1 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms