Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Gm15131-201ENSMUST00000119124 595 ntBASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gm18393-201ENSMUST00000208349 1131 ntBASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gm8712-201ENSMUST00000221090 701 ntBASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 AC113031.8-201ENSMUST00000227856 631 ntBASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ddx54Q8K4L0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx54Q8K4L0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ddx54Q8K4L0 Gm43399-201ENSMUST00000202546 2374 ntBASIC17.39■□□□□ 0.38
Ddx54Q8K4L0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Gm19459-201ENSMUST00000176240 835 ntBASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Gm44651-201ENSMUST00000207343 372 ntBASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ddx54Q8K4L0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Snord83b-201ENSMUST00000104546 94 ntBASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.38■□□□□ 0.37
Ddx54Q8K4L0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm9062-201ENSMUST00000117712 727 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm6335-201ENSMUST00000118081 1194 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm12286-201ENSMUST00000119246 1002 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm7816-201ENSMUST00000119884 1194 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm15542-201ENSMUST00000121585 1194 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm8913-201ENSMUST00000209491 641 ntBASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ddx54Q8K4L0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms