Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lin28aQ8K3Y3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lin28aQ8K3Y3 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lin28aQ8K3Y3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Lin28aQ8K3Y3 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Lin28aQ8K3Y3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Lin28aQ8K3Y3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gm12390-201ENSMUST00000117897 397 ntBASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gm44719-201ENSMUST00000206404 149 ntBASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Matn2-206ENSMUST00000228570 2798 ntBASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lin28aQ8K3Y3 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.51□□□□□ -0.41
Lin28aQ8K3Y3 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms