Protein–RNA interactions for Protein: Q8K389

Cdk5rap2, CDK5 regulatory subunit-associated protein 2, mousemouse

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap2Q8K389 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Mir433-201ENSMUST00000093564 124 ntBASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cdk5rap2Q8K389 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Gm6992-201ENSMUST00000217973 1607 ntBASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cdk5rap2Q8K389 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Gm19994-201ENSMUST00000217086 586 ntBASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cdk5rap2Q8K389 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm15547-201ENSMUST00000122152 333 ntBASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm4864-201ENSMUST00000219894 1461 ntBASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm44891-201ENSMUST00000208817 2223 ntBASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm27341-201ENSMUST00000183570 106 ntBASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Gm9924-202ENSMUST00000192760 2311 ntBASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Cdk5rap2Q8K389 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gm7857-201ENSMUST00000117957 358 ntBASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gm8856-201ENSMUST00000185254 1144 ntBASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cdk5rap2Q8K389 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms