Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.71□□□□□ -0.21
CopaQ8CIE6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.71□□□□□ -0.21
CopaQ8CIE6 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CopaQ8CIE6 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.7□□□□□ -0.22
CopaQ8CIE6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gm28911-201ENSMUST00000188837 117 ntBASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.7□□□□□ -0.22
CopaQ8CIE6 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.7□□□□□ -0.22
CopaQ8CIE6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CopaQ8CIE6 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.7□□□□□ -0.22
CopaQ8CIE6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CopaQ8CIE6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.69□□□□□ -0.22
CopaQ8CIE6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gm18905-201ENSMUST00000205454 928 ntBASIC13.69□□□□□ -0.22
CopaQ8CIE6 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.69□□□□□ -0.22
CopaQ8CIE6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gm25857-201ENSMUST00000082788 129 ntBASIC13.69□□□□□ -0.22
CopaQ8CIE6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CopaQ8CIE6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Gm37660-201ENSMUST00000192754 1732 ntBASIC13.68□□□□□ -0.22
CopaQ8CIE6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CopaQ8CIE6 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms