Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Gm5279-201ENSMUST00000199575 745 ntBASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Gm5425-201ENSMUST00000214125 459 ntBASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 AC162801.1-201ENSMUST00000220612 198 ntBASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup88Q8CEC0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup88Q8CEC0 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nup88Q8CEC0 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC15.83■□□□□ 0.13
Nup88Q8CEC0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Gm12341-201ENSMUST00000119724 503 ntBASIC15.83■□□□□ 0.12
Nup88Q8CEC0 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup88Q8CEC0 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Gm13829-201ENSMUST00000119600 138 ntBASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Mir7654-201ENSMUST00000185082 70 ntBASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nup88Q8CEC0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Gm15678-201ENSMUST00000117573 960 ntBASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Gm12960-201ENSMUST00000120017 1066 ntBASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Gm17150-201ENSMUST00000165577 381 ntBASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.81■□□□□ 0.12
Nup88Q8CEC0 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms