Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm43514-201ENSMUST00000198852 424 ntBASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 AW822252-206ENSMUST00000208904 237 ntBASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lysmd4Q8CC84 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm13365-201ENSMUST00000121188 973 ntBASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm24420-201ENSMUST00000176676 59 ntBASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lysmd4Q8CC84 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Gm24543-201ENSMUST00000103867 82 ntBASIC12□□□□□ -0.49
Lysmd4Q8CC84 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12□□□□□ -0.49
Lysmd4Q8CC84 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12□□□□□ -0.49
Lysmd4Q8CC84 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Lysmd4Q8CC84 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms