Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Gm12500-202ENSMUST00000186471 2428 ntBASIC13□□□□□ -0.33
SynpoQ8CC35 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
SynpoQ8CC35 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm12341-201ENSMUST00000119724 503 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm15806-201ENSMUST00000120696 955 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm8602-201ENSMUST00000184045 607 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.99□□□□□ -0.33
SynpoQ8CC35 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SynpoQ8CC35 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Gm9002-201ENSMUST00000178437 499 ntBASIC12.98□□□□□ -0.33
SynpoQ8CC35 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.98□□□□□ -0.33
SynpoQ8CC35 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.98□□□□□ -0.33
SynpoQ8CC35 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.98□□□□□ -0.33
SynpoQ8CC35 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SynpoQ8CC35 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.97□□□□□ -0.33
SynpoQ8CC35 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms