Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm22175-201ENSMUST00000175007 78 ntBASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm27680-201ENSMUST00000184192 160 ntBASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm27772-201ENSMUST00000184900 187 ntBASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Smim4Q8C1Q6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm18905-201ENSMUST00000205454 928 ntBASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm6888-201ENSMUST00000221983 706 ntBASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm3695-201ENSMUST00000087222 1009 ntBASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Smim4Q8C1Q6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm13453-201ENSMUST00000118708 357 ntBASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm17837-201ENSMUST00000186435 985 ntBASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 Gm37935-201ENSMUST00000192012 982 ntBASIC11.23□□□□□ -0.61
Smim4Q8C1Q6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms