Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Gm20445-201ENSMUST00000061905 565 ntBASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trerf1Q8BXJ2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Gm9522-201ENSMUST00000182394 926 ntBASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trerf1Q8BXJ2 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Syt7-205ENSMUST00000224135 1557 ntBASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm7488-201ENSMUST00000117148 684 ntBASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trerf1Q8BXJ2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms