Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
SprnQ8BWU1 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm6415-201ENSMUST00000118488 348 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 AC126408.1-201ENSMUST00000225184 523 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Rubie-203ENSMUST00000227803 2430 ntBASIC11.84□□□□□ -0.51
SprnQ8BWU1 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
SprnQ8BWU1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
SprnQ8BWU1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
SprnQ8BWU1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
SprnQ8BWU1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
SprnQ8BWU1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm13223-201ENSMUST00000118609 747 ntBASIC11.83□□□□□ -0.52
SprnQ8BWU1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm27618-201ENSMUST00000183671 60 ntBASIC11.83□□□□□ -0.52
SprnQ8BWU1 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.83□□□□□ -0.52
SprnQ8BWU1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
SprnQ8BWU1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SprnQ8BWU1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms