Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Nop53Q8BK35 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm14767-201ENSMUST00000121559 586 ntBASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm27989-201ENSMUST00000184721 107 ntBASIC14.39□□□□□ -0.11
Nop53Q8BK35 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nop53Q8BK35 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gm27437-201ENSMUST00000183429 107 ntBASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gm5425-201ENSMUST00000214125 459 ntBASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gm9063-201ENSMUST00000223299 582 ntBASIC14.38□□□□□ -0.11
Nop53Q8BK35 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nop53Q8BK35 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Mir6977-201ENSMUST00000184960 64 ntBASIC14.37□□□□□ -0.11
Nop53Q8BK35 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.37□□□□□ -0.11
Nop53Q8BK35 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.37□□□□□ -0.11
Nop53Q8BK35 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.37□□□□□ -0.11
Nop53Q8BK35 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nop53Q8BK35 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms