Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.65□□□□□ -0.39
Clrn3Q8BHH8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Syt7-204ENSMUST00000223586 1344 ntBASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
Clrn3Q8BHH8 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Gm10576-201ENSMUST00000191927 825 ntBASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Clrn3Q8BHH8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm15321-201ENSMUST00000121290 288 ntBASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Gm9797-201ENSMUST00000052902 613 ntBASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Clrn3Q8BHH8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms