Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.25□□□□□ -0.29
Ubp1Q811S7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Ubp1Q811S7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.24□□□□□ -0.29
Ubp1Q811S7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Mir7654-201ENSMUST00000185082 70 ntBASIC13.24□□□□□ -0.29
Ubp1Q811S7 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.24□□□□□ -0.29
Ubp1Q811S7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Gm24447-201ENSMUST00000083977 338 ntBASIC13.24□□□□□ -0.29
Ubp1Q811S7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ubp1Q811S7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm15678-201ENSMUST00000117573 960 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm17330-201ENSMUST00000221047 165 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.23□□□□□ -0.29
Ubp1Q811S7 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ubp1Q811S7 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ubp1Q811S7 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms