Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Gm29667-201ENSMUST00000190817 490 ntBASIC12.97□□□□□ -0.33
Trim36Q80WG7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.97□□□□□ -0.33
Trim36Q80WG7 AA619741-201ENSMUST00000195095 646 ntBASIC12.97□□□□□ -0.33
Trim36Q80WG7 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.97□□□□□ -0.33
Trim36Q80WG7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trim36Q80WG7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.96□□□□□ -0.33
Trim36Q80WG7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.96□□□□□ -0.33
Trim36Q80WG7 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.96□□□□□ -0.33
Trim36Q80WG7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.96□□□□□ -0.33
Trim36Q80WG7 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.96□□□□□ -0.33
Trim36Q80WG7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trim36Q80WG7 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.96□□□□□ -0.34
Trim36Q80WG7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trim36Q80WG7 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gm4875-201ENSMUST00000118257 786 ntBASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gm15653-201ENSMUST00000119247 907 ntBASIC12.95□□□□□ -0.34
Trim36Q80WG7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gm11424-201ENSMUST00000121929 829 ntBASIC12.95□□□□□ -0.34
Trim36Q80WG7 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gm29741-201ENSMUST00000192667 421 ntBASIC12.95□□□□□ -0.34
Trim36Q80WG7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trim36Q80WG7 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms