Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TUBA1AQ71U36 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 AC009336.1-201ENST00000608941 1553 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 MYCLP1-201ENST00000372451 1075 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 RPS2P1-201ENST00000434010 821 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 RNPS1P1-201ENST00000507437 918 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 MTDHP4-201ENST00000600287 670 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 TNRC18P2-201ENST00000417666 2714 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 EGFEM1P-202ENST00000431685 1563 ntBASIC15.24■□□□□ 0.03
TUBA1AQ71U36 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TUBA1AQ71U36 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 AC073347.1-201ENST00000421633 2643 ntBASIC15.23■□□□□ 0.03
TUBA1AQ71U36 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 AF186996.4-201ENST00000467186 377 ntBASIC15.23■□□□□ 0.03
TUBA1AQ71U36 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 AC079776.4-201ENST00000511039 504 ntBASIC15.23■□□□□ 0.03
TUBA1AQ71U36 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.23■□□□□ 0.03
TUBA1AQ71U36 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TUBA1AQ71U36 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TUBA1AQ71U36 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms