Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm22190-201ENSMUST00000103827 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm22191-201ENSMUST00000103831 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24721-201ENSMUST00000103849 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm28018-201ENSMUST00000103869 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm26399-201ENSMUST00000103937 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm15653-201ENSMUST00000119247 907 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm25349-201ENSMUST00000177728 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm23616-201ENSMUST00000177797 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm25871-201ENSMUST00000177816 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24752-201ENSMUST00000178240 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24496-201ENSMUST00000178287 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm25649-201ENSMUST00000178476 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm25548-201ENSMUST00000178681 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm23147-201ENSMUST00000178841 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm26095-201ENSMUST00000179270 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm22171-201ENSMUST00000179283 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm23936-201ENSMUST00000179354 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm22619-201ENSMUST00000179516 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm25255-201ENSMUST00000179579 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24755-201ENSMUST00000179691 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm26506-201ENSMUST00000179692 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm25086-201ENSMUST00000179931 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm23243-201ENSMUST00000180047 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24659-201ENSMUST00000180212 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm24169-201ENSMUST00000180244 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm23689-201ENSMUST00000180354 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm27359-201ENSMUST00000184153 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm27785-201ENSMUST00000184268 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm27466-201ENSMUST00000184396 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm27703-201ENSMUST00000184836 110 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm10766-202ENSMUST00000194123 606 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Shd-206ENSMUST00000225145 998 ntBASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Scaf4Q6PFF0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Gm28630-201ENSMUST00000187806 498 ntBASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Gm43474-201ENSMUST00000196415 774 ntBASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Gm9229-201ENSMUST00000222777 126 ntBASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Scaf4Q6PFF0 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Scaf4Q6PFF0 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms