Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Gm8885-201ENSMUST00000189382 598 ntBASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Gm38317-201ENSMUST00000195564 343 ntBASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nup98Q6PFD9 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Gm37201-201ENSMUST00000191845 523 ntBASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC15.51■□□□□ 0.07
Nup98Q6PFD9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm11531-201ENSMUST00000117614 555 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm13875-201ENSMUST00000120162 282 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm16296-201ENSMUST00000159905 325 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm13665-201ENSMUST00000120830 528 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm5904-201ENSMUST00000210286 865 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Gm39404-201ENSMUST00000216350 313 ntBASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Nup98Q6PFD9 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Mir874-201ENSMUST00000104769 76 ntBASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Gm14109-201ENSMUST00000118814 309 ntBASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Gm5950-201ENSMUST00000213337 772 ntBASIC15.49■□□□□ 0.07
Nup98Q6PFD9 AC165260.3-202ENSMUST00000224550 1031 ntBASIC15.49■□□□□ 0.07
Nup98Q6PFD9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Nup98Q6PFD9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms