Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Hmgb4Q6P8W9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm8062-201ENSMUST00000139696 444 ntBASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm27731-201ENSMUST00000185192 107 ntBASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm38223-201ENSMUST00000194484 695 ntBASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hmgb4Q6P8W9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gm29649-201ENSMUST00000185649 419 ntBASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gm42550-201ENSMUST00000201553 960 ntBASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Hmgb4Q6P8W9 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Gm14660-201ENSMUST00000119809 575 ntBASIC14.03□□□□□ -0.16
Hmgb4Q6P8W9 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms