Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 Gm22058-201ENSMUST00000083393 310 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col12a1Q60847 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.92□□□□□ -0.34
Col12a1Q60847 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.92□□□□□ -0.34
Col12a1Q60847 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col12a1Q60847 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Gm3318-201ENSMUST00000217604 1183 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Gm24845-201ENSMUST00000158034 109 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.91□□□□□ -0.34
Col12a1Q60847 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.91□□□□□ -0.34
Col12a1Q60847 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col12a1Q60847 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC12.91□□□□□ -0.34
Col12a1Q60847 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.9□□□□□ -0.34
Col12a1Q60847 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm14832-201ENSMUST00000121289 322 ntBASIC12.9□□□□□ -0.34
Col12a1Q60847 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.9□□□□□ -0.34
Col12a1Q60847 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm7902-201ENSMUST00000198842 947 ntBASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC12.9□□□□□ -0.34
Col12a1Q60847 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col12a1Q60847 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col12a1Q60847 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Gm6867-201ENSMUST00000219165 425 ntBASIC12.89□□□□□ -0.35
Col12a1Q60847 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Gm5904-201ENSMUST00000210286 865 ntBASIC12.89□□□□□ -0.35
Col12a1Q60847 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col12a1Q60847 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col12a1Q60847 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.89□□□□□ -0.35
Col12a1Q60847 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms