Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Xrcc1Q60596 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.81□□□□□ -0.36
Xrcc1Q60596 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.81□□□□□ -0.36
Xrcc1Q60596 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.81□□□□□ -0.36
Xrcc1Q60596 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.81□□□□□ -0.36
Xrcc1Q60596 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Xrcc1Q60596 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm27892-201ENSMUST00000185017 106 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm7287-201ENSMUST00000205267 602 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm5186-201ENSMUST00000218781 920 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm26315-201ENSMUST00000083890 321 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.8□□□□□ -0.36
Xrcc1Q60596 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Xrcc1Q60596 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms