Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gm8810-201ENSMUST00000172895 754 ntBASIC14.25□□□□□ -0.13
Shroom1Q5SX79 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gm40466-201ENSMUST00000212174 422 ntBASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gm8399-201ENSMUST00000082300 1117 ntBASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gm16177-201ENSMUST00000120728 718 ntBASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gm27331-201ENSMUST00000183705 60 ntBASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Mir6420-201ENSMUST00000185032 102 ntBASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.24□□□□□ -0.13
Shroom1Q5SX79 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm23931-201ENSMUST00000103842 109 ntBASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Shroom1Q5SX79 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms