Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Mir698-201ENSMUST00000102164 109 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm2810-201ENSMUST00000118681 990 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm37714-201ENSMUST00000194742 342 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim40Q3UWA4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.56□□□□□ -0.4
Trim40Q3UWA4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Rubie-203ENSMUST00000227803 2430 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Gm15678-201ENSMUST00000117573 960 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Gm18206-201ENSMUST00000207027 926 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Mir497b-201ENSMUST00000093601 125 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim40Q3UWA4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Mir874-201ENSMUST00000104769 76 ntBASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim40Q3UWA4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms