Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gm2308-201ENSMUST00000166539 1004 ntBASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gm37230-201ENSMUST00000194491 818 ntBASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Cmtm5-203ENSMUST00000227441 610 ntBASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Cog3-203ENSMUST00000227473 4197 ntBASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cks1brtQ3UNC9 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.88
Cks1brtQ3UNC9 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms