Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Sox8Q04886 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Sox8Q04886 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.14□□□□□ -0.15
Sox8Q04886 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Sox8Q04886 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Sox8Q04886 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Sox8Q04886 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Gm8213-201ENSMUST00000118191 441 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Gm13369-201ENSMUST00000119442 987 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.13□□□□□ -0.15
Sox8Q04886 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox8Q04886 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Sox8Q04886 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox8Q04886 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.13□□□□□ -0.15
Sox8Q04886 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox8Q04886 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.13□□□□□ -0.15
Sox8Q04886 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Sox8Q04886 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Sox8Q04886 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.12□□□□□ -0.15
Sox8Q04886 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Sox8Q04886 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
Sox8Q04886 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Gm14660-201ENSMUST00000119809 575 ntBASIC14.12□□□□□ -0.15
Sox8Q04886 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Sox8Q04886 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.12□□□□□ -0.15
Sox8Q04886 Gm29705-201ENSMUST00000212598 474 ntBASIC14.12□□□□□ -0.15
Sox8Q04886 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.12□□□□□ -0.15
Sox8Q04886 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Sox8Q04886 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.12□□□□□ -0.15
Sox8Q04886 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.12□□□□□ -0.15
Sox8Q04886 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Sox8Q04886 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.12□□□□□ -0.15
Sox8Q04886 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms