Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm43170-201ENSMUST00000199827 612 ntBASIC13.62□□□□□ -0.23
Gabpb1Q00420 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.62□□□□□ -0.23
Gabpb1Q00420 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Gm19220-201ENSMUST00000222682 803 ntBASIC13.62□□□□□ -0.23
Gabpb1Q00420 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.62□□□□□ -0.23
Gabpb1Q00420 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Gm16215-201ENSMUST00000161990 637 ntBASIC13.61□□□□□ -0.23
Gabpb1Q00420 Mir6977-201ENSMUST00000184960 64 ntBASIC13.61□□□□□ -0.23
Gabpb1Q00420 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.61□□□□□ -0.23
Gabpb1Q00420 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.61□□□□□ -0.23
Gabpb1Q00420 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.61□□□□□ -0.23
Gabpb1Q00420 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gabpb1Q00420 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.6□□□□□ -0.23
Gabpb1Q00420 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Syt7-205ENSMUST00000224135 1557 ntBASIC13.6□□□□□ -0.23
Gabpb1Q00420 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gabpb1Q00420 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.59□□□□□ -0.23
Gabpb1Q00420 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Gabpb1Q00420 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms