Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcaP82350 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SgcaP82350 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.23□□□□□ -0.61
SgcaP82350 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.23□□□□□ -0.61
SgcaP82350 AA543401-201ENSMUST00000164248 1269 ntBASIC11.23□□□□□ -0.61
SgcaP82350 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SgcaP82350 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
SgcaP82350 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SgcaP82350 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.23□□□□□ -0.61
SgcaP82350 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SgcaP82350 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.22□□□□□ -0.61
SgcaP82350 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.22□□□□□ -0.61
SgcaP82350 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.22□□□□□ -0.61
SgcaP82350 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC11.22□□□□□ -0.61
SgcaP82350 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Mir5131-201ENSMUST00000175426 93 ntBASIC11.22□□□□□ -0.61
SgcaP82350 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SgcaP82350 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
SgcaP82350 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
SgcaP82350 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.22□□□□□ -0.61
SgcaP82350 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.22□□□□□ -0.61
SgcaP82350 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
SgcaP82350 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SgcaP82350 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.22□□□□□ -0.61
SgcaP82350 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SgcaP82350 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.21□□□□□ -0.61
SgcaP82350 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.21□□□□□ -0.61
SgcaP82350 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.21□□□□□ -0.61
SgcaP82350 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.21□□□□□ -0.61
SgcaP82350 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.21□□□□□ -0.61
SgcaP82350 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.21□□□□□ -0.61
SgcaP82350 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.21□□□□□ -0.61
SgcaP82350 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
SgcaP82350 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.21□□□□□ -0.61
SgcaP82350 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC11.21□□□□□ -0.61
SgcaP82350 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.21□□□□□ -0.61
SgcaP82350 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.21□□□□□ -0.61
SgcaP82350 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.21□□□□□ -0.61
SgcaP82350 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.21□□□□□ -0.61
SgcaP82350 Mir5126-201ENSMUST00000175513 77 ntBASIC11.21□□□□□ -0.61
SgcaP82350 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.21□□□□□ -0.61
SgcaP82350 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
SgcaP82350 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms