Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.19□□□□□ -0.62
Pdlim4P70271 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Pdlim4P70271 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm37917-201ENSMUST00000194711 392 ntBASIC11.18□□□□□ -0.62
Pdlim4P70271 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.18□□□□□ -0.62
Pdlim4P70271 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.18□□□□□ -0.62
Pdlim4P70271 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdlim4P70271 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
Pdlim4P70271 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pdlim4P70271 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.18□□□□□ -0.62
Pdlim4P70271 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.17□□□□□ -0.62
Pdlim4P70271 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdlim4P70271 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.17□□□□□ -0.62
Pdlim4P70271 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.17□□□□□ -0.62
Pdlim4P70271 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.17□□□□□ -0.62
Pdlim4P70271 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.17□□□□□ -0.62
Pdlim4P70271 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdlim4P70271 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pdlim4P70271 Gm37844-201ENSMUST00000192473 4097 ntBASIC11.17□□□□□ -0.62
Pdlim4P70271 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.17□□□□□ -0.62
Pdlim4P70271 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms