Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.56□□□□□ -0.4
Six5P70178 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Mir6392-201ENSMUST00000184924 108 ntBASIC12.56□□□□□ -0.4
Six5P70178 Gm42550-201ENSMUST00000201553 960 ntBASIC12.56□□□□□ -0.4
Six5P70178 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.56□□□□□ -0.4
Six5P70178 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Six5P70178 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.56□□□□□ -0.4
Six5P70178 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.56□□□□□ -0.4
Six5P70178 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Six5P70178 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.56□□□□□ -0.4
Six5P70178 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Six5P70178 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Six5P70178 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.55□□□□□ -0.4
Six5P70178 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
Six5P70178 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Gm15678-201ENSMUST00000117573 960 ntBASIC12.55□□□□□ -0.4
Six5P70178 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.55□□□□□ -0.4
Six5P70178 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.55□□□□□ -0.4
Six5P70178 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.55□□□□□ -0.4
Six5P70178 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.55□□□□□ -0.4
Six5P70178 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Six5P70178 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Six5P70178 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.54□□□□□ -0.4
Six5P70178 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.54□□□□□ -0.4
Six5P70178 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.54□□□□□ -0.4
Six5P70178 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.54□□□□□ -0.4
Six5P70178 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.54□□□□□ -0.4
Six5P70178 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Six5P70178 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Six5P70178 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.54□□□□□ -0.4
Six5P70178 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Six5P70178 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Six5P70178 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.54□□□□□ -0.4
Six5P70178 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.54□□□□□ -0.4
Six5P70178 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.54□□□□□ -0.4
Six5P70178 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Six5P70178 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Six5P70178 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.54□□□□□ -0.4
Six5P70178 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Six5P70178 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.54□□□□□ -0.4
Six5P70178 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Six5P70178 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Six5P70178 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Six5P70178 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Six5P70178 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms