Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.6□□□□□ -0.23
ThraP63058 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ThraP63058 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.6□□□□□ -0.23
ThraP63058 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ThraP63058 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.59□□□□□ -0.23
ThraP63058 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
ThraP63058 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.59□□□□□ -0.23
ThraP63058 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.59□□□□□ -0.23
ThraP63058 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
ThraP63058 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.59□□□□□ -0.23
ThraP63058 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 Gm5279-201ENSMUST00000199575 745 ntBASIC13.59□□□□□ -0.23
ThraP63058 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.59□□□□□ -0.23
ThraP63058 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
ThraP63058 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
ThraP63058 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.59□□□□□ -0.23
ThraP63058 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ThraP63058 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
ThraP63058 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.58□□□□□ -0.23
ThraP63058 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
ThraP63058 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ThraP63058 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.58□□□□□ -0.24
ThraP63058 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.58□□□□□ -0.24
ThraP63058 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Gm9002-201ENSMUST00000178437 499 ntBASIC13.58□□□□□ -0.24
ThraP63058 Gm27701-201ENSMUST00000184498 110 ntBASIC13.58□□□□□ -0.24
ThraP63058 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.58□□□□□ -0.24
ThraP63058 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.58□□□□□ -0.24
ThraP63058 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
ThraP63058 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.58□□□□□ -0.24
ThraP63058 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.58□□□□□ -0.24
ThraP63058 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
ThraP63058 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ThraP63058 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ThraP63058 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ThraP63058 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms