Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gabra1P62812 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.27□□□□□ -0.61
Gabra1P62812 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gabra1P62812 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Gabra1P62812 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.26□□□□□ -0.61
Gabra1P62812 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Gabra1P62812 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.26□□□□□ -0.61
Gabra1P62812 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.26□□□□□ -0.61
Gabra1P62812 Gm11543-201ENSMUST00000120758 370 ntBASIC11.26□□□□□ -0.61
Gabra1P62812 Gm11452-201ENSMUST00000122376 690 ntBASIC11.26□□□□□ -0.61
Gabra1P62812 Gm18195-201ENSMUST00000207604 706 ntBASIC11.26□□□□□ -0.61
Gabra1P62812 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.26□□□□□ -0.61
Gabra1P62812 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.26□□□□□ -0.61
Gabra1P62812 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Gabra1P62812 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gabra1P62812 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.26□□□□□ -0.61
Gabra1P62812 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.26□□□□□ -0.61
Gabra1P62812 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Gabra1P62812 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Gabra1P62812 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.25□□□□□ -0.61
Gabra1P62812 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.25□□□□□ -0.61
Gabra1P62812 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.25□□□□□ -0.61
Gabra1P62812 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.25□□□□□ -0.61
Gabra1P62812 CT030684.1-201ENSMUST00000227292 914 ntBASIC11.25□□□□□ -0.61
Gabra1P62812 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.25□□□□□ -0.61
Gabra1P62812 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.25□□□□□ -0.61
Gabra1P62812 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.25□□□□□ -0.61
Gabra1P62812 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Gabra1P62812 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.25□□□□□ -0.61
Gabra1P62812 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.25□□□□□ -0.61
Gabra1P62812 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Gabra1P62812 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gabra1P62812 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Gabra1P62812 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Gabra1P62812 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
Gabra1P62812 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.24□□□□□ -0.61
Gabra1P62812 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms