Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Lsm3P62311 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm3P62311 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm3P62311 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.19□□□□□ -0.46
Lsm3P62311 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Lsm3P62311 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.18□□□□□ -0.46
Lsm3P62311 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.18□□□□□ -0.46
Lsm3P62311 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Lsm3P62311 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Lsm3P62311 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.18□□□□□ -0.46
Lsm3P62311 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.18□□□□□ -0.46
Lsm3P62311 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.18□□□□□ -0.46
Lsm3P62311 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.18□□□□□ -0.46
Lsm3P62311 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.18□□□□□ -0.46
Lsm3P62311 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.18□□□□□ -0.46
Lsm3P62311 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Lsm3P62311 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Lsm3P62311 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.17□□□□□ -0.46
Lsm3P62311 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Gm13597-201ENSMUST00000121239 375 ntBASIC12.17□□□□□ -0.46
Lsm3P62311 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm3P62311 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm3P62311 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Lsm3P62311 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.17□□□□□ -0.46
Lsm3P62311 Gm27300-201ENSMUST00000184085 97 ntBASIC12.17□□□□□ -0.46
Lsm3P62311 Gm27335-201ENSMUST00000184758 97 ntBASIC12.17□□□□□ -0.46
Lsm3P62311 Gm44719-201ENSMUST00000206404 149 ntBASIC12.17□□□□□ -0.46
Lsm3P62311 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.17□□□□□ -0.46
Lsm3P62311 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Lsm3P62311 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Lsm3P62311 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Lsm3P62311 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC12.17□□□□□ -0.46
Lsm3P62311 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Lsm3P62311 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Lsm3P62311 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.16□□□□□ -0.46
Lsm3P62311 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Lsm3P62311 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Lsm3P62311 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms