Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
CtskP55097 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CtskP55097 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CtskP55097 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CtskP55097 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Gm13612-201ENSMUST00000119276 390 ntBASIC13.18□□□□□ -0.3
CtskP55097 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.18□□□□□ -0.3
CtskP55097 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Mir6420-201ENSMUST00000185032 102 ntBASIC13.18□□□□□ -0.3
CtskP55097 Gm29127-201ENSMUST00000188304 517 ntBASIC13.18□□□□□ -0.3
CtskP55097 Gm38223-201ENSMUST00000194484 695 ntBASIC13.18□□□□□ -0.3
CtskP55097 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.18□□□□□ -0.3
CtskP55097 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
CtskP55097 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.18□□□□□ -0.3
CtskP55097 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.18□□□□□ -0.3
CtskP55097 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.18□□□□□ -0.3
CtskP55097 Gm38116-201ENSMUST00000193873 1533 ntBASIC13.18□□□□□ -0.3
CtskP55097 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CtskP55097 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CtskP55097 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.17□□□□□ -0.3
CtskP55097 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.17□□□□□ -0.3
CtskP55097 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CtskP55097 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Mir698-201ENSMUST00000102164 109 ntBASIC13.17□□□□□ -0.3
CtskP55097 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CtskP55097 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.17□□□□□ -0.3
CtskP55097 Gm24196-201ENSMUST00000179161 110 ntBASIC13.17□□□□□ -0.3
CtskP55097 Gm27731-201ENSMUST00000185192 107 ntBASIC13.17□□□□□ -0.3
CtskP55097 Gm29649-201ENSMUST00000185649 419 ntBASIC13.17□□□□□ -0.3
CtskP55097 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Gm29741-201ENSMUST00000192667 421 ntBASIC13.17□□□□□ -0.3
CtskP55097 Gm38671-201ENSMUST00000200573 130 ntBASIC13.17□□□□□ -0.3
CtskP55097 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.17□□□□□ -0.3
CtskP55097 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CtskP55097 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CtskP55097 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CtskP55097 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CtskP55097 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms