Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SftpdP50404 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SftpdP50404 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SftpdP50404 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.11□□□□□ -0.15
SftpdP50404 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Gm14928-201ENSMUST00000120198 477 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.11□□□□□ -0.15
SftpdP50404 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SftpdP50404 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.11□□□□□ -0.15
SftpdP50404 Gm23984-201ENSMUST00000157139 203 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Gm6180-201ENSMUST00000065243 498 ntBASIC14.11□□□□□ -0.15
SftpdP50404 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Gm26315-201ENSMUST00000083890 321 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SftpdP50404 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.11□□□□□ -0.15
SftpdP50404 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SftpdP50404 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SftpdP50404 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.1□□□□□ -0.15
SftpdP50404 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.1□□□□□ -0.15
SftpdP50404 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SftpdP50404 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.1□□□□□ -0.15
SftpdP50404 Gm44397-201ENSMUST00000195950 113 ntBASIC14.1□□□□□ -0.15
SftpdP50404 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.1□□□□□ -0.15
SftpdP50404 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.1□□□□□ -0.15
SftpdP50404 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.1□□□□□ -0.15
SftpdP50404 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SftpdP50404 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SftpdP50404 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SftpdP50404 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SftpdP50404 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.09□□□□□ -0.15
SftpdP50404 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.09□□□□□ -0.15
SftpdP50404 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SftpdP50404 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.09□□□□□ -0.15
SftpdP50404 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.09□□□□□ -0.15
SftpdP50404 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SftpdP50404 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SftpdP50404 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SftpdP50404 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.09□□□□□ -0.15
SftpdP50404 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms