Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Nkx2-1P50220 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Mir698-201ENSMUST00000102164 109 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Mir1895-201ENSMUST00000122615 79 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 Rprl2-201ENSMUST00000157150 290 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gm20553-201ENSMUST00000204205 844 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.1□□□□□ -0.63
Nkx2-1P50220 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Nkx2-1P50220 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm6222-201ENSMUST00000120787 396 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms